Gluten-Free Cinnamon Crunch Bagels

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A gluten-free cinnamon sugar bagel on a white plate, sliced and spread with cream cheese, surrounded by cinnamon sticks and other bagels.

These gluten-free cinnamon crunch bagels start with the same dough from my gluten-free bagels, with a cinnamon paste swirled through the center so every bite has visible ribbons instead of a faint background flavor.

After boiling, the tops get pressed with a buttery brown sugar and cinnamon crumble that bakes into a crunchy, craggy crust. The dough still mixes, proofs, and boils exactly the same way as the original, so the texture and chew you already know stays the same.

Why You’ll Love This Recipe

  • Same trusted dough. This starts with the identical gluten-free bagel dough from my base recipe, so the texture and chew are already dialed in.
  • Real cinnamon ribbons. A cinnamon paste gets folded into the dough right before shaping, giving distinct streaks instead of an all-over tint.
  • A crunchy, buttery topping. The brown sugar and cinnamon crumble presses into the tops after boiling and bakes into a crisp, craggy crust.
  • Just one rise. Like the base recipe, this dough proofs once before boiling, so there’s no long overnight wait.

More gluten-free bagels to try: gluten-free bagels / gluten-free pumpkin bagels / gluten-free blueberry bagels

Several gluten-free cinnamon crunch bagels topped with a thick layer of cinnamon streusel, arranged on white parchment paper near a cinnamon stick.

Ingredient notes:

  • Flour – This uses the same brown rice flour, tapioca starch, and potato starch combination as my other gluten-free bagels. Don’t swap in a one-to-one gluten-free blend here; each of the three flours is carrying different weight in the structure.
  • Whole Psyllium Husk – Look for whole husk, not the powdered form, which clumps differently once it’s wet. I buy Anthony’s whole psyllium husk (affiliate link) and mix in warm water until it turns gel-like before adding anything else.
  • Instant Yeast – This goes straight into the dry mix with no proofing step first, which is why I reach for instant over active dry.
  • Cinnamon Paste – Cinnamon and water mixed into a thick paste, then dotted into the dough before shaping. Stop mixing while you can still see streaks; that’s what becomes the ribbon.
  • Cinnamon Crunch Topping – Brown sugar, granulated sugar, a spoonful of gluten-free flour, cinnamon, and melted butter, rubbed together into a crumble. I used Bob’s Red Mill 1-to-1 Gluten-Free Baking Flour, the blue bag, for the flour here.
  • Brown Sugar – Most bagel recipes call for a barley malt syrup solution for boiling, but that contains gluten. Brown sugar gives the same glossy, crackly crust without it.

Making changes to a recipe can result in recipe failure. Any substitutions listed below are simple changes that I believe will work in this recipe, but results are not guaranteed.

How I Adapted My Bagel Dough for Cinnamon Crunch

The dough itself didn’t need to change at all. The same brown rice flour, tapioca starch, potato starch, and psyllium husk blend from my regular bagels holds up fine with a swirl of cinnamon running through it.

The challenge was keeping the cinnamon in ribbons instead of letting it dye the whole dough tan. Mixing a dry cinnamon-sugar blend straight into the dough spread it evenly instead of leaving streaks, so I switched to a thick cinnamon-and-water paste, dotted it around the dough, and mixed just a few seconds on low. Stopping while distinct streaks remain is what keeps the ribbons visible after baking.

For the topping, I used a mix of brown sugar, granulated sugar, a little flour, cinnamon, and melted butter. It gets pressed on right after the egg wash goes on, while that’s still wet, which is what gives the topping a craggy, crunchy texture instead of melting into a glaze.

Several gluten-free cinnamon-streusel bagels on parchment paper, including one sliced open to reveal a cinnamon filling.

Recipe FAQs

Can I use cinnamon sugar instead of making the paste?

The paste keeps the cinnamon in distinct ribbons instead of dissolving into the dough. A dry cinnamon-sugar mix won’t hold together the same way when you dot it into the dough.

Why does the topping use both brown sugar and granulated sugar?

Brown sugar keeps the topping soft once baked, while granulated sugar helps it hold its shape and stay a little crisp in clumps.

Can I add more cinnamon ribbons?

You can dot in extra paste, but go easy. Too much at once blends into the dough instead of staying in distinct streaks.

Expert Tips

  • Mix the ribbons in just a few seconds. Stop as soon as streaks remain. Overmixing turns the cinnamon into an all-over tint instead of visible ribbons.
  • Press the topping into the egg wash while it’s still wet. That’s what the crumble actually sticks to, so brush the egg wash on right before adding the topping rather than letting it sit first.
  • Watch the topping color, not just the clock. Tent with foil around the 15-minute mark if it’s browning faster than the centers are cooking through.
  • Weigh your ingredients. This dough is sensitive to ratios, so a kitchen scale gives more consistent results than cups alone.

Storage Instructions

Storing: Best eaten the day they’re made. Once they’ve cooled, a sealed container on the counter keeps them fine for a day or two, though the topping loses some crunch. A few minutes in the toaster brings the texture right back.

Freezing: Let the bagels cool fully, slice them, then tuck them into a freezer-safe bag. They’ll hold for about three months and go straight from the freezer into the toaster, no defrosting required.

An open-faced gluten-free cinnamon sugar bagel spread with cream cheese on a white plate.

Serving Suggestions

These are good warm out of the oven, split and toasted with a swipe of salted butter, though whipped cream cheese plays well against the crunch of the topping too.

  1. Gluten-Free Breakfast Casserole – a savory bacon and egg bake that gives a brunch spread something besides sweets.
  2. Gluten-Free Quiche Lorraine – another savory option, built on the classic bacon and gruyere custard.
  3. Gluten-Free Pancakes – for a table with more than one sweet option, these go well right alongside.
  4. Chai Spice Mix – stir a mug of homemade chai using this spice mix while the bagels are still warm from the toaster.
Gluten-free cinnamon crunch bagels on parchment paper, with one bagel sliced to show a dark cinnamon filling.
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Gluten-Free Cinnamon Crunch Bagels

These gluten-free cinnamon crunch bagels swirl ribbons of cinnamon through the same lean dough from my gluten-free bagels, then get boiled for that classic chew and topped with a buttery cinnamon-sugar crumble before baking.
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Prep Time 25 minutes
Cook Time 30 minutes
Inactive Time 45 minutes
Total Time 1 hour 40 minutes
Servings 6 bagels

Ingredients

Dry Ingredients:

  • 190 g brown rice flour
  • 115 g tapioca starch
  • 50 g potato starch
  • 25 g (2 tablespoons) granulated sugar
  • 8 g (2 teaspoons) kosher salt
  • 7 g (2¼ teaspoons) instant yeast
  • 6 g (2 teaspoons) xanthan gum

Psyllium Gel:

  • 16 g whole psyllium husk
  • 160 g warm water - 100 to 110°F

Wet Ingredients:

  • 140 g warm water - 100 to 110°F
  • 28 g (2 tablespoons) olive oil
  • 5 g (1 teaspoons) apple cider vinegar

Cinnamon Ribbons:

  • 16 g (2 tablespoons) ground cinnamon
  • 20 g (4 teaspoons) water

Cinnamon Crunch Topping:

  • 67 g (⅓ cup) packed light brown sugar
  • 37.5 g (3 tablespoons) granulated sugar
  • 35 g (¼ cup) gluten-free 1-to-1 baking flour - I used Bob’s Red Mill 1-to-1 Gluten-Free Baking Flour, the blue bag
  • 8 g (1 tablespoon) ground cinnamon
  • 42 g (3 tablespoons) melted salted butter - cooled slightly

For Boiling:

  • 8 cups water
  • 3 tablespoons brown sugar

For the Egg Wash:

  • 1 large egg - beaten

**Use the toggle button above to turn the instruction photos on and off!

Instructions

  • Mix 67 g (⅓ cup) packed light brown sugar, 37.5 g (3 tablespoons) granulated sugar, 35 g (¼ cup) gluten-free 1-to-1 baking flour, and 8 g (1 tablespoon) ground cinnamon in a small bowl. Stir in 42 g (3 tablespoons) melted salted butter. Set aside to cool and firm while you make the bagel dough.
  • Stir together 16 g (2 tablespoons) ground cinnamon and 20 g (4 teaspoons) water in a small bowl. Set aside.
  • In the bowl of a stand mixer, whisk together 190 g brown rice flour, 115 g tapioca starch, 50 g potato starch, 25 g (2 tablespoons) granulated sugar, 8 g (2 teaspoons) kosher salt, 7 g (2¼ teaspoons) instant yeast, and 6 g (2 teaspoons) xanthan gum.
  • Stir 16 g whole psyllium husk into 160 g warm water. Let stand for 2 to 3 minutes until thickened.
  • Stir 140 g warm water, 28 g (2 tablespoons) olive oil, and 5 g (1 teaspoons) apple cider vinegar into the psyllium gel.
  • Add the wet mixture to the dry ingredients. Mix with the dough hook on low until combined, then on medium for about 5 minutes until smooth and cohesive.
  • Stop the mixer and dot small amounts of the cinnamon paste around the dough. Mix on low for 3 to 5 seconds, then check. Stop while distinct streaks remain. If needed, distribute with one gentle fold by hand rather than continuing to mix.
  • Divide the dough into 6 equal portions. Gently form each into a smooth ball without excessive kneading.
  • Poke a hole through the center of each ball and stretch it to about 1½ to 2 inches wide. Place on a parchment-lined baking sheet.
  • Cover loosely and let rise for about 45 minutes, or until noticeably puffy but not doubled.
  • Preheat the oven to 425°F during the final stretch of proofing.
  • Bring 8 cups water and 3 tablespoons brown sugar to a gentle boil in a wide pot.
  • Boil 2 to 3 bagels at a time for 45 seconds per side. Remove to a wire rack and let excess water drain for a few minutes.
  • Return the bagels to the parchment-lined sheet. Brush the tops with 1 large egg, beaten. Break the cinnamon crunch topping into small clumps, divide evenly among the bagels, and gently press onto the tops.
  • Bake at 425°F for 27 to 30 minutes, until the bagels are firm and the centers reach 205°F. Check the topping at 15 minutes and loosely tent with foil if it’s browning too quickly before the centers finish.
  • Transfer to a wire rack and cool uncovered for at least 45 minutes before slicing.

Notes

  • Flour blend: Do not substitute with a pre-made gluten-free flour blend. This recipe is built around a specific ratio of brown rice flour, tapioca starch, and potato starch. Each flour plays a specific role in the structure and chew of the bagel.
  • Psyllium husk: Use whole psyllium husk, not powder. I use Anthony’s Whole Psyllium Husk (affiliate link). Mix it with the warm water first to form a gel before adding the remaining wet ingredients.
  • Cinnamon ribbons: Mix the cinnamon paste into the dough just until streaks remain. Overmixing will swirl the cinnamon throughout the dough instead of leaving distinct ribbons.
  • Storage: Bagels are best the day they’re made. Store in an airtight container at room temperature for up to 2 days or freeze sliced for up to 3 months.

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